Automated reconstruction of the cerebral cortex in multiple sclerosis patients

N. Shiee; P. L. Bazin; Daniel S. Reich; D. L. Pham

doi:10.1109/ISBI.2009.5193311

Automated reconstruction of the cerebral cortex in multiple sclerosis patients

N. Shiee^*, P. L. Bazin, Daniel S. Reich, D. L. Pham

^*Corresponding author for this work

Radiology and Bioengineering

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

1 Scopus citations

Abstract

Although cortical atrophy in multiple sclerosis (MS) has been reported in the literature, most cortical reconstruction techniques do not account for lesions. In this work, we propose an automated pipeline for cortical reconstruction from magnetic resonance brain images with MS lesions. The pipeline extends previously well validated methods to allow for the presence of lesions and to accommodate multichannel imaging. We validate this approach on simulated and real images. Application of the pipeline to 103 MS brains produces thickness measurements that agree well with the literature.

Original language	English
Title of host publication	Proceedings - 2009 IEEE International Symposium on Biomedical Imaging
Subtitle of host publication	From Nano to Macro, ISBI 2009
Pages	1334-1337
Number of pages	4
DOIs	https://doi.org/10.1109/ISBI.2009.5193311
State	Published - 2009
Event	2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009 - Boston, MA, United States Duration: 28 Jun 2009 → 1 Jul 2009

Publication series

Name	Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009

Conference

Conference	2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009
Country/Territory	United States
City	Boston, MA
Period	28/06/09 → 1/07/09

Keywords

Cortical reconstruction
Cortical thickness
Lesion segmentation
Multiple sclerosis

Access to Document

10.1109/ISBI.2009.5193311

Cite this

Shiee, N., Bazin, P. L., Reich, D. S., & Pham, D. L. (2009). Automated reconstruction of the cerebral cortex in multiple sclerosis patients. In Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009 (pp. 1334-1337). Article 5193311 (Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009). https://doi.org/10.1109/ISBI.2009.5193311

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title = "Automated reconstruction of the cerebral cortex in multiple sclerosis patients",

abstract = "Although cortical atrophy in multiple sclerosis (MS) has been reported in the literature, most cortical reconstruction techniques do not account for lesions. In this work, we propose an automated pipeline for cortical reconstruction from magnetic resonance brain images with MS lesions. The pipeline extends previously well validated methods to allow for the presence of lesions and to accommodate multichannel imaging. We validate this approach on simulated and real images. Application of the pipeline to 103 MS brains produces thickness measurements that agree well with the literature.",

keywords = "Cortical reconstruction, Cortical thickness, Lesion segmentation, Multiple sclerosis",

author = "N. Shiee and Bazin, {P. L.} and Reich, {Daniel S.} and Pham, {D. L.}",

year = "2009",

doi = "10.1109/ISBI.2009.5193311",

language = "English",

isbn = "9781424439324",

series = "Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009",

pages = "1334--1337",

booktitle = "Proceedings - 2009 IEEE International Symposium on Biomedical Imaging",

note = "2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009 ; Conference date: 28-06-2009 Through 01-07-2009",

}

Shiee, N, Bazin, PL, Reich, DS & Pham, DL 2009, Automated reconstruction of the cerebral cortex in multiple sclerosis patients. in Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009., 5193311, Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009, pp. 1334-1337, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009, Boston, MA, United States, 28/06/09. https://doi.org/10.1109/ISBI.2009.5193311

Automated reconstruction of the cerebral cortex in multiple sclerosis patients. / Shiee, N.; Bazin, P. L.; Reich, Daniel S. et al.
Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009. 2009. p. 1334-1337 5193311 (Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

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Shiee N, Bazin PL, Reich DS, Pham DL. Automated reconstruction of the cerebral cortex in multiple sclerosis patients. In Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009. 2009. p. 1334-1337. 5193311. (Proceedings - 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2009). doi: 10.1109/ISBI.2009.5193311