Effect of CHRFAM7A Δ2bp gene variant on secondary inflammation after spinal cord injury

Mingkuan Lin*, Wan Huang, Nadine Kabbani, Mark M. Theiss, John F. Hamilton, James M. Ecklund, Yvette P. Conley, Yoram Vodovotz, David Brienza, Amy K. Wagner, Emily Robbins, Gwendolyn A. Sowa, Robert H. Lipsky

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

10 Scopus citations


The α7 neuronal nicotinic acetylcholine receptors (α7nAChRs) are essential for anti-inflammatory responses. The human-specific CHRFAM7A gene and its 2bp deletion polymorphism (Δ2bp variant) encodes a structurally-deficient α7nAChRs that may impact the antiinflammatory function. We studied 45 spinal cord injury (SCI) patients for up to six weeks post SCI to investigate the role of the Δ2bp variant on multiple circulating inflammatory mediators and two outcome measures (neuropathic pain and risk of pressure ulcers). The patient's SCI were classified as either severe or mild. Missing values were imputed. Overall genetic effect was conducted with independent sample t-test and corrected with false discovery rate (FDR). Univariate analysis and regression analysis were applied to evaluate the Δ2bp effects on temporal variation of inflammatory mediators post SCI and their interaction with outcome measures. In severe SCI, the Δ2bp carriers showed higher levels of circulating inflammatory mediators than the Δ2bp non-carriers in TNF-α (FDR = 9.6×10-4), IFN-γ (FDR = 1.3×10-3), IL-13 (FDR = 1.6×10-3), CCL11 (FDR = 2.1×10-3), IL-12p70 (FDR = 2.2×10-3), IL-8 (FDR = 2.2×10-3), CXCL10 (FDR = 3.1×10-3), CCL4 (FDR = 5.7×10-3), IL-12p40 (FDR = 7.1×10-3), IL-1b (FDR = 0.014), IL-15 (FDR = 0.024), and IL-2 (FDR = 0.037). IL-8 and CCL2 were negatively associated with days post injury (DPI) for the Δ2bp carriers (P = 2×10-7 and P = 2×10-8, respectively) and IL-5 was positively associated with DPI for the Δ2bp non-carriers (P = 0.015). Neuropathic pain was marginally positively associated with IL-13 for the Δ2bp carriers (P = 0.056). In mild SCI, the Δ2bp carriers had lower circulating levels of IL-15 (FDR = 0.04) than the Δ2bp non-carriers. Temporal variation of inflammatory mediators post SCI was not associated with the Δ2bp variant. For the mild SCI Δ2bp carriers, risk of pressure ulcers was positively associated with circulating levels of IFN-γ, CXCL10, and CCL4 and negatively associated with circulating levels of IL-12p70. These findings support an important role for the human-specific CHRFAM7A Δ2bp gene variant in modifying anti-inflammatory function of α7nAChRs following SCI.

Original languageEnglish
Article numbere0251110
JournalPLoS ONE
Issue number5 May
StatePublished - May 2021
Externally publishedYes


Dive into the research topics of 'Effect of CHRFAM7A Δ2bp gene variant on secondary inflammation after spinal cord injury'. Together they form a unique fingerprint.

Cite this