Joint Image and Label Self-super-Resolution

Samuel W. Remedios*, Shuo Han, Blake E. Dewey, Dzung L. Pham, Jerry L. Prince, Aaron Carass

*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

2 Scopus citations

Abstract

We propose a method to jointly super-resolve an anisotropic image volume along with its corresponding voxel labels without external training data. Our method is inspired by internally trained super-resolution, or self-super-resolution (SSR) techniques that target anisotropic, low-resolution (LR) magnetic resonance (MR) images. While resulting images from such methods are quite useful, their corresponding LR labels—derived from either automatic algorithms or human raters—are no longer in correspondence with the super-resolved volume. To address this, we develop an SSR deep network that takes both an anisotropic LR MR image and its corresponding LR labels as input and produces both a super-resolved MR image and its super-resolved labels as output. We evaluated our method with 50 T1 -weighted brain MR images 4 × down-sampled with 10 automatically generated labels. In comparison to other methods, our method had superior Dice across all labels and competitive metrics on the MR image. Our approach is the first reported method for SSR of paired anisotropic image and label volumes.

Original languageEnglish
Title of host publicationSimulation and Synthesis in Medical Imaging - 6th International Workshop, SASHIMI 2021, Held in Conjunction with MICCAI 2021, Proceedings
EditorsDavid Svoboda, Ninon Burgos, Jelmer M. Wolterink, Can Zhao
PublisherSpringer Science and Business Media Deutschland GmbH
Pages14-23
Number of pages10
ISBN (Print)9783030875916
DOIs
StatePublished - 2021
Event6th International Workshop on Simulation and Synthesis in Medical Imaging, SASHIMI 2021, held in conjunction with the 24th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2021 - Virtual, Online
Duration: 27 Sep 202127 Sep 2021

Publication series

NameLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
Volume12965 LNCS
ISSN (Print)0302-9743
ISSN (Electronic)1611-3349

Conference

Conference6th International Workshop on Simulation and Synthesis in Medical Imaging, SASHIMI 2021, held in conjunction with the 24th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2021
CityVirtual, Online
Period27/09/2127/09/21

Keywords

  • MRI
  • Segmentation
  • Super-resolution

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