TY - JOUR
T1 - Molecular identification of Crimean-Congo haemorrhagic fever virus in Hyalomma rufipes and Amblyomma variegatum in the Upper East Region of Ghana
AU - Addo, Seth Offei
AU - Bentil, Ronald Essah
AU - Addae, Charlotte Adwoa
AU - Baako, Bernice Olivia Ama
AU - Yartey, Kevin Nii
AU - Ansah‑Owusu, Jane
AU - Tawiah-Mensah, Christopher Nii Laryea
AU - Agbodzi, Bright
AU - Kumordjie, Selassie
AU - Yeboah, Clara
AU - Asoala, Victor
AU - Dunford, James C.
AU - Larbi, John Asiedu
AU - Baidoo, Philip Kweku
AU - Wilson, Michael David
AU - Diclaro, Joseph W.
AU - Dadzie, Samuel K.
N1 - Publisher Copyright:
© The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature 2024.
PY - 2024/3
Y1 - 2024/3
N2 - Sampled ticks were screened for Crimean-Congo haemorrhagic fever virus (CCHFV) using an assay that targets the nucleoprotein gene region of the S segment, a conserved region of the CCHFV genome. Minimum infection rates of 0.34% and 0.10% were obtained when testing pools of Hyalomma rufipes and Amblyomma variegatum, respectively. Next-generation sequencing and phylogenetic analysis showed that the S and L segments of the CCHFV isolate clustered with those of similar isolates of genotype III. However, analysis of the M segment showed that reassortment had occurred, causing this segment to cluster with those of isolates of genotype I, providing the first evidence of such an occurrence in Ghana.
AB - Sampled ticks were screened for Crimean-Congo haemorrhagic fever virus (CCHFV) using an assay that targets the nucleoprotein gene region of the S segment, a conserved region of the CCHFV genome. Minimum infection rates of 0.34% and 0.10% were obtained when testing pools of Hyalomma rufipes and Amblyomma variegatum, respectively. Next-generation sequencing and phylogenetic analysis showed that the S and L segments of the CCHFV isolate clustered with those of similar isolates of genotype III. However, analysis of the M segment showed that reassortment had occurred, causing this segment to cluster with those of isolates of genotype I, providing the first evidence of such an occurrence in Ghana.
UR - http://www.scopus.com/inward/record.url?scp=85187139371&partnerID=8YFLogxK
U2 - 10.1007/s00705-024-05983-y
DO - 10.1007/s00705-024-05983-y
M3 - Article
C2 - 38446223
AN - SCOPUS:85187139371
SN - 0304-8608
VL - 169
JO - Archives of Virology
JF - Archives of Virology
IS - 3
M1 - 62
ER -