TY - JOUR
T1 - Multimodal, multitask, multiattention (M3) deep learning detection of reticular pseudodrusen
T2 - Toward automated and accessible classification of age-related macular degeneration
AU - Chen, Qingyu
AU - Keenan, Tiarnan D.L.
AU - Allot, Alexis
AU - Peng, Yifan
AU - Agrón, Elvira
AU - Domalpally, Amitha
AU - Klaver, Caroline C.W.
AU - Luttikhuizen, Daniel T.
AU - Colyer, Marcus H.
AU - Cukras, Catherine A.
AU - Wiley, Henry E.
AU - Teresa Magone, M.
AU - Cousineau-Krieger, Chantal
AU - Wong, Wai T.
AU - Zhu, Yingying
AU - Chew, Emily Y.
AU - Lu, Zhiyong
N1 - Publisher Copyright:
© 2021 Published by Oxford University Press on behalf of the American Medical Informatics Association.
PY - 2021/6/1
Y1 - 2021/6/1
N2 - Objective: Reticular pseudodrusen (RPD), a key feature of age-related macular degeneration (AMD), are poorly detected by human experts on standard color fundus photography (CFP) and typically require advanced imaging modalities such as fundus autofluorescence (FAF). The objective was to develop and evaluate the performance of a novel multimodal, multitask, multiattention (M3) deep learning framework on RPD detection. Materials and Methods: A deep learning framework (M3) was developed to detect RPD presence accurately using CFP alone, FAF alone, or both, employing >8000 CFP-FAF image pairs obtained prospectively (Age-Related Eye Disease Study 2). The M3 framework includes multimodal (detection from single or multiple image modalities), multitask (training different tasks simultaneously to improve generalizability), and multiattention (improving ensembled feature representation) operation. Performance on RPD detection was compared with state-of-the-art deep learning models and 13 ophthalmologists; performance on detection of 2 other AMD features (geographic atrophy and pigmentary abnormalities) was also evaluated. Results: For RPD detection, M3 achieved an area under the receiver-operating characteristic curve (AUROC) of 0.832, 0.931, and 0.933 for CFP alone, FAF alone, and both, respectively. M3 performance on CFP was very substantially superior to human retinal specialists (median F1 score = 0.644 vs 0.350). External validation (the Rotterdam Study) demonstrated high accuracy on CFP alone (AUROC, 0.965). The M3 framework also accurately detected geographic atrophy and pigmentary abnormalities (AUROC, 0.909 and 0.912, respectively), demonstrating its generalizability. Conclusions: This study demonstrates the successful development, robust evaluation, and external validation of a novel deep learning framework that enables accessible, accurate, and automated AMD diagnosis and prognosis.
AB - Objective: Reticular pseudodrusen (RPD), a key feature of age-related macular degeneration (AMD), are poorly detected by human experts on standard color fundus photography (CFP) and typically require advanced imaging modalities such as fundus autofluorescence (FAF). The objective was to develop and evaluate the performance of a novel multimodal, multitask, multiattention (M3) deep learning framework on RPD detection. Materials and Methods: A deep learning framework (M3) was developed to detect RPD presence accurately using CFP alone, FAF alone, or both, employing >8000 CFP-FAF image pairs obtained prospectively (Age-Related Eye Disease Study 2). The M3 framework includes multimodal (detection from single or multiple image modalities), multitask (training different tasks simultaneously to improve generalizability), and multiattention (improving ensembled feature representation) operation. Performance on RPD detection was compared with state-of-the-art deep learning models and 13 ophthalmologists; performance on detection of 2 other AMD features (geographic atrophy and pigmentary abnormalities) was also evaluated. Results: For RPD detection, M3 achieved an area under the receiver-operating characteristic curve (AUROC) of 0.832, 0.931, and 0.933 for CFP alone, FAF alone, and both, respectively. M3 performance on CFP was very substantially superior to human retinal specialists (median F1 score = 0.644 vs 0.350). External validation (the Rotterdam Study) demonstrated high accuracy on CFP alone (AUROC, 0.965). The M3 framework also accurately detected geographic atrophy and pigmentary abnormalities (AUROC, 0.909 and 0.912, respectively), demonstrating its generalizability. Conclusions: This study demonstrates the successful development, robust evaluation, and external validation of a novel deep learning framework that enables accessible, accurate, and automated AMD diagnosis and prognosis.
KW - Age-Related Eye Disease Study 2
KW - age-related macular degeneration
KW - deep learning
KW - multiattention deep learning
KW - multimodal deep learning
KW - multitask training
KW - reticular pseudodrusen
KW - subretinal drusenoid deposits
UR - http://www.scopus.com/inward/record.url?scp=85108304392&partnerID=8YFLogxK
U2 - 10.1093/jamia/ocaa302
DO - 10.1093/jamia/ocaa302
M3 - Article
C2 - 33792724
AN - SCOPUS:85108304392
SN - 1067-5027
VL - 28
SP - 1135
EP - 1148
JO - Journal of the American Medical Informatics Association
JF - Journal of the American Medical Informatics Association
IS - 6
ER -